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🧬

CASSIA Pipeline

Complete end-to-end analysis

API Configuration
Get API key
⚙️ Model Configuration
🔍

Initial Annotation

Identify cell types from marker genes

Selected: Claude Haiku 4.5
medium quality
fast
$low cost
📊

Quality Scoring

Evaluate annotation quality and confidence

Selected: Gemini 2.5 Flash
medium quality
fast
$low cost
🚀

Annotation Boost

Improve low-scoring annotations with advanced analysis

Selected: Claude Haiku 4.5
medium quality
fast
$low cost
📁 Data Upload
⚙️ Analysis Configuration
🚀 Analysis Control

Please complete the following to start analysis:

  • Set API key
  • Upload marker data file
📊 Analysis Info
Provider:openrouter
Model:anthropic/claude-sonnet-4.5
Agent Models:
🔍 Annotation:anthropic/claude-haiku-4.5
📊 Scoring:google/gemini-2.5-flash
🚀 Boost:anthropic/claude-haiku-4.5